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This form will allow you to generate a report on the gene of your choice using the population and Minimum Allele Settings in standard use by the InnateImmunity PGA Gene Pipeline. If you would like to generate a report using your own data, and your own population and minraf setttings, please see the User-configurable form.

First, select one of the available Genes

Second, select one of the following report types, choosing the specific format which best suits your needs.

Raw data Prettybase
Reference Seq.
SNP flanks
 
SNP Allele Counts Web Page As Text Spreadsheet
SNP Allele Frequencies Web Page As Text Spreadsheet
SNP Genotype Counts Web Page As Text Spreadsheet
SNP Genotype Frequencies Web Page As Text Spreadsheet
Visual Genotypes (ALL SNP) VGPlot  
Pairwise LD Maps LDplot  
Haplotypes (>10%SNP) Web Page As TextSpreadsheet
Finally, Click "Show me" to see the report you have requested: