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The LD plots are generated automatically by the InnateImmunity pipeline using software written by .

The raw data is partitioned by population. Each diagram shows the offsets of the SNPs within the gene across the top and down the right-hand side of the diagram. The intersection of each row and column shows a color reprensentation of the linkage disequilibrium between the two SNPs. Darker colors representing higher values.

Default minraf is 10%.