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Table of contents

Practical Data Management: Laboratory Information Management Systems

Laboratory Informatics

What is Informatics?

Slide 4

Laboratory Information

Laboratory Informatics Defined

Laboratory Usage Requirements for LIMS

Traditional Functions of Lab Notebooks

Paper-Based Information is Limited

Paper Lab Notebooks Are Limited

Higher Complexity, Higher throughput

Paper Notebooks Not Conducive to High Throughput

Concepts of LIMS

Those Who Benefit from LIMS

Needs addressed by LIMS

Need for LIMS: Information Management

Need for LIMS: Quality Assurance & Control

Need for LIMS: Error Reduction

Need for LIMS: Fast Sample Turnaround

Time Savings

AIMS

Quality Report

Sequenom Utils

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Comparison QC

Slide 26

Genotype QA

Slide 28

Where to Start?

Slide 30

Data Flow in the Laboratory

Data vs. Metadata

Genesis of LIMS

LIMS Implementation

Slide 35

Functional Model of LIMS

Data Capture

Data analysis

Reporting

Lab Management

Systems Management

What is the Information?

What is the Information? Growth of Sequence Data

What is the Information? Single Nucleotide Polymorphisms

Slide 45

Where is the Information?

What is the Information? The Rest of Biology

Slide 48

The Loss…

The Consequences…

The Moral…

What is a Database?

Look at a real-life example…

LIMS Requirements for Analytical Labs

Author: Brent Richter

Homepage: https://innateimmunity.net/

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