Bioinformatics Tools
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Bioinformatics Tools |
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| Goldenpath version: 13 dbSNP build: 112 |
| Gene: | ABCC1 |
| Region searched: | chr16:15315628-15528392 |
| Match orientation: | Forward |
| Processing time: | 7.82 seconds |
| Position in consensus |
Absolute position |
Relative positions |
All 1 | All 2 | All 3 | All 4 | Minor allele frequency |
Base in consensus |
Known base (from GoldenPath) |
Known SNP (from dbSNP) |
Assigned name |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 704 | chr16:15383984 | 58181 A/G 58181 A/G 58181 A/G 58181 A/G 58181 A/G 58181 A/G 58181 A/G |
G (115) | A (5) | 4% | G | G | IIPGA-ABCC1-704 | |||
| 741 | chr16:15384021 | 58218 C/T 58218 C/T 58218 C/T 58218 C/T 58218 C/T 58218 C/T 58218 C/T |
T (114) | C (2) | 2% | T | T | IIPGA-ABCC1-741 | |||
| 1012 | chr16:15384292 | 58489 A/G 58489 A/G 58489 A/G 58489 A/G 58489 A/G 58489 A/G 58489 A/G |
G (19) | A (3) | 7% | T | T | IIPGA-ABCC1-1012 | |||
| 1021 | chr16:15384301 | 58498 C/T 58498 C/T 58498 C/T 58498 C/T 58498 C/T 58498 C/T 58498 C/T |
C (12) | T (12) | 26% | T | T | IIPGA-ABCC1-1021 | |||
| 2851 | chr16:15386131 | 60328 C/T 60328 C/T 60328 C/T 60328 C/T 60328 C/T 60328 C/T 60328 C/T |
C (56) | T (2) | 3% | T | T | IIPGA-ABCC1-2851 | |||
| 3376 | chr16:15386656 | 60853 C/T 60853 C/T 60853 C/T 60853 C/T 60853 C/T 60853 C/T 60853 C/T |
C (57) | T (1) | 2% | T | T | IIPGA-ABCC1-3376 | |||
| 4198 | chr16:15387478 | 61675 A/G 61675 A/G 61675 A/G 61675 A/G 61675 A/G 61675 A/G 61675 A/G |
G (36) | A (14) | 25% | C | C | IIPGA-ABCC1-4198 | |||
| 9073 | chr16:15392353 | 66550 C/G 66550 C/G 66550 C/G 66550 C/G 66550 C/G 66550 C/G 66550 C/G |
G (45) | C (9) | 8% | C | C | rs185005 | IIPGA-ABCC1-9073 | ||
| 9082 | chr16:15392362 | 66559 C/T 66559 C/T 66559 C/T 66559 C/T 66559 C/T 66559 C/T 66559 C/T |
C (46) | T (10) | 8% | T | T | rs246215 | IIPGA-ABCC1-9082 | ||
| 29343 | chr16:15412623 | 86820 A/C 86820 A/C 86820 A/C 86820 A/C 86820 A/C 86820 A/C 86820 A/C |
C (76) | A (38) | 32% | C | C | rs903880 | IIPGA-ABCC1-29343 | ||
| 29353 | chr16:15412633 | 86830 C/G 86830 C/G 86830 C/G 86830 C/G 86830 C/G 86830 C/G 86830 C/G |
C (62) | G (50) | 42% | C | C | rs246232 | IIPGA-ABCC1-29353 | ||
| 38542 | chr16:15421823 | 96020 C/T 96020 C/T 96020 C/T 96020 C/T 96020 C/T 96020 C/T 96020 C/T |
T (89) | C (35) | 28% | T | T | rs35587 | IIPGA-ABCC1-38542 | ||
| 38706 | chr16:15421987 | 96184 A/G 96184 A/G 96184 A/G 96184 A/G 96184 A/G 96184 A/G 96184 A/G |
A (84) | G (36) | 29% | A | A | rs35588 | IIPGA-ABCC1-38706 | ||
| 41052 | chr16:15424333 | 98530 C/T 98530 C/T 98530 C/T 98530 C/T 98530 C/T 98530 C/T 98530 C/T |
C (45) | T (3) | 6% | C | C | IIPGA-ABCC1-41052 | |||
| 45622 | chr16:15428904 | 103101 C/G 103101 C/G 103101 C/G 103101 C/G 103101 C/G 103101 C/G 103101 C/G |
C (71) | G (55) | 43% | C | C | rs3743526 | IIPGA-ABCC1-45622 | ||
| 48726 | chr16:15432010 | 106207 C/T 106207 C/T 106207 C/T 106207 C/T 106207 C/T 106207 C/T 106207 C/T |
C (52) | T (8) | 8% | C | C | rs3765129 | IIPGA-ABCC1-48726 | ||
| 60754 | chr16:15444037 | 118234 A/G 118234 A/G 118234 A/G 118234 A/G 118234 A/G 118234 A/G 118234 A/G |
G (60) | A (2) | 2% | G | G | rs4148348 | IIPGA-ABCC1-60754 | ||
| 60802 | chr16:15444085 | 118282 A/G 118282 A/G 118282 A/G 118282 A/G 118282 A/G 118282 A/G 118282 A/G |
A (99) | G (15) | 12% | G | G | rs35604 | IIPGA-ABCC1-60802 | ||
| 60845 | chr16:15444128 | 118325 C/T 118325 C/T 118325 C/T 118325 C/T 118325 C/T 118325 C/T 118325 C/T |
C (112) | T (16) | 12% | T | T | rs35605 | IIPGA-ABCC1-60845 | ||
| 60865 | chr16:15444148 | 118345 C/T 118345 C/T 118345 C/T 118345 C/T 118345 C/T 118345 C/T 118345 C/T |
C (120) | T (8) | 6% | C | C | IIPGA-ABCC1-60865 | |||
| 61090 | chr16:15444373 | 118570 C/T 118570 C/T 118570 C/T 118570 C/T 118570 C/T 118570 C/T 118570 C/T |
C (109) | T (19) | 15% | C | C | rs35606 | IIPGA-ABCC1-61090 | ||
| 64452 | chr16:15447733 | 121930 A/G 121930 A/G 121930 A/G 121930 A/G 121930 A/G 121930 A/G 121930 A/G |
G (122) | A (4) | 3% | G | G | IIPGA-ABCC1-64452 | |||
| 69221 | chr16:15452503 | 126700 C/T 126700 C/T 126700 C/T 126700 C/T 126700 C/T 126700 C/T 126700 C/T |
C (106) | T (2) | 2% | C | C | IIPGA-ABCC1-69221 | |||
| 69304 | chr16:15452586 | 126783 G/T 126783 G/T 126783 G/T 126783 G/T 126783 G/T 126783 G/T 126783 G/T |
G (55) | T (1) | 1% | G | G | rs4148350 | IIPGA-ABCC1-69304 | ||
| 72048 | chr16:15455330 | 129527 C/T 129527 C/T 129527 C/T 129527 C/T 129527 C/T 129527 C/T 129527 C/T |
C (119) | T (5) | 4% | C | C | IIPGA-ABCC1-72048 | |||
| 72343 | chr16:15455625 | 129822 C/T 129822 C/T 129822 C/T 129822 C/T 129822 C/T 129822 C/T 129822 C/T |
C (48) | T (14) | 11% | C | C | rs2644983 | IIPGA-ABCC1-72343 | ||
| 72344 | chr16:15455626 | 129823 G/T 129823 G/T 129823 G/T 129823 G/T 129823 G/T 129823 G/T 129823 G/T |
G (56) | T (6) | 5% | G | G | IIPGA-ABCC1-72344 | |||
| 72375 | chr16:15455657 | 129854 A/G 129854 A/G 129854 A/G 129854 A/G 129854 A/G 129854 A/G 129854 A/G |
A (59) | G (3) | 2% | A | A | IIPGA-ABCC1-72375 | |||
| 76029 | chr16:15459311 | 133508 A/C 133508 A/C 133508 A/C 133508 A/C 133508 A/C 133508 A/C 133508 A/C |
C (124) | A (2) | 2% | C | C | IIPGA-ABCC1-76029 | |||
| 76102 | chr16:15459384 | 133581 A/G 133581 A/G 133581 A/G 133581 A/G 133581 A/G 133581 A/G 133581 A/G |
G (120) | A (2) | 2% | G | G | rs4148356 | IIPGA-ABCC1-76102 | ||
| 79725 | chr16:15463005 | 137202 A/G 137202 A/G 137202 A/G 137202 A/G 137202 A/G 137202 A/G 137202 A/G |
G (119) | A (5) | 4% | G | G | IIPGA-ABCC1-79725 | |||
| 83062 | chr16:15466341 | 140538 C/G 140538 C/G 140538 C/G 140538 C/G 140538 C/G 140538 C/G 140538 C/G |
G (77) | C (15) | 16% | C | C | rs2074087 | IIPGA-ABCC1-83062 | ||
| 83065 | chr16:15466344 | 140541 A/G 140541 A/G 140541 A/G 140541 A/G 140541 A/G 140541 A/G 140541 A/G |
G (90) | A (2) | 2% | G | G | IIPGA-ABCC1-83065 | |||
| 83196 | chr16:15466475 | 140672 G/T 140672 G/T 140672 G/T 140672 G/T 140672 G/T 140672 G/T 140672 G/T |
G (91) | T (1) | 1% | G | G | IIPGA-ABCC1-83196 | |||
| 95568 | chr16:15478845 | 153042 A/G 153042 A/G 153042 A/G 153042 A/G 153042 A/G 153042 A/G 153042 A/G |
G (182) | A (2) | 1% | G | G | IIPGA-ABCC1-95568 | |||
| 95623 | chr16:15478900 | 153097 C/T 153097 C/T 153097 C/T 153097 C/T 153097 C/T 153097 C/T 153097 C/T |
C (180) | T (4) | 2% | C | C | IIPGA-ABCC1-95623 | |||
| 95660 | chr16:15478937 | 153134 A/G 153134 A/G 153134 A/G 153134 A/G 153134 A/G 153134 A/G 153134 A/G |
G (164) | A (2) | 1% | G | G | IIPGA-ABCC1-95660 | |||
| 95671 | chr16:15478948 | 153145 A/G 153145 A/G 153145 A/G 153145 A/G 153145 A/G 153145 A/G 153145 A/G |
A (101) | G (11) | 6% | A | A | rs2269800 | IIPGA-ABCC1-95671 | ||
| 99358 | chr16:15482634 | 156831 C/T 156831 C/T 156831 C/T 156831 C/T 156831 C/T 156831 C/T 156831 C/T |
C (166) | T (2) | 1% | C | C | IIPGA-ABCC1-99358 | |||
| 107404 | chr16:15490679 | 164876 C/T 164876 C/T 164876 C/T 164876 C/T 164876 C/T 164876 C/T 164876 C/T |
C (112) | T (6) | 5% | C | C | IIPGA-ABCC1-107404 | |||
| 107411 | chr16:15490686 | 164883 C/T 164883 C/T 164883 C/T 164883 C/T 164883 C/T 164883 C/T 164883 C/T |
T (110) | C (2) | 2% | T | T | IIPGA-ABCC1-107411 | |||
| 117493 | chr16:15500768 | 174965 C/T 174965 C/T 174965 C/T 174965 C/T 174965 C/T 174965 C/T 174965 C/T |
C (188) | T (2) | 1% | C | C | IIPGA-ABCC1-117493 | |||
| 124711 | chr16:15507987 | 182184 A/G 182184 A/G 182184 A/G 182184 A/G 182184 A/G 182184 A/G 182184 A/G |
G (61) | A (1) | 1% | G | G | IIPGA-ABCC1-124711 | |||
| 126910 | chr16:15510186 | 184383 C/T 184383 C/T 184383 C/T 184383 C/T 184383 C/T 184383 C/T 184383 C/T |
C (96) | T (2) | 2% | C | C | IIPGA-ABCC1-126910 | |||
| 127081 | chr16:15510357 | 184554 A/G 184554 A/G 184554 A/G 184554 A/G 184554 A/G 184554 A/G 184554 A/G |
G (80) | A (20) | 19% | G | G | rs2239330 | IIPGA-ABCC1-127081 | ||
| 129124 | chr16:15512400 | 186597 A/G 186597 A/G 186597 A/G 186597 A/G 186597 A/G 186597 A/G 186597 A/G |
G (42) | A (16) | 15% | G | G | rs212087 | IIPGA-ABCC1-129124 | ||
| 129341 | chr16:15512617 | 186814 C/T 186814 C/T 186814 C/T 186814 C/T 186814 C/T 186814 C/T 186814 C/T |
C (94) | T (2) | 2% | C | C | IIPGA-ABCC1-129341 |
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