 |
SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
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|
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Prettybase importer |
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Gene: |
ADCY1 |
Region searched: |
chr7:45,344,901-45,513,492 |
Match orientation: |
Forward |
Processing time: |
3.2 seconds |
Total SNPs: |
16 |
Correct: |
16 |
|
|
Imported SNPs |
|
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
3732 |
chr7:45429013 |
74090 A/G |
|
G (59) |
A (5) |
|
|
8% |
G |
G |
rs3735672 |
IIPGA-ADCY1-3732 |
11965 |
chr7:45438075 |
83152 C/G |
|
G (35) |
C (13) |
|
|
21% |
G |
C |
|
IIPGA-ADCY1-11965 |
14366 |
chr7:45440480 |
85557 C/T |
456 P/L |
C (63) |
T (1) |
|
|
2% |
C |
C |
|
IIPGA-ADCY1-14366 |
61515 |
chr7:45458690 |
103767 C/T |
|
T (63) |
C (1) |
|
|
2% |
T |
T |
|
IIPGA-ADCY1-61515 |
61548 |
chr7:45458723 |
103800 A/G |
|
G (62) |
A (2) |
|
|
3% |
G |
G |
|
IIPGA-ADCY1-61548 |
63010 |
chr7:45460182 |
105259 A/T |
|
T (41) |
A (1) |
|
|
2% |
T |
T |
|
IIPGA-ADCY1-63010 |
68459 |
chr7:45465476 |
110553 C/T |
|
T (28) |
C (10) |
|
|
16% |
C |
T |
rs2461106 |
IIPGA-ADCY1-68459 |
83740 |
chr7:45483908 |
128985 G/T |
|
T (17) |
G (15) |
|
|
26% |
G |
T |
rs2247685 |
IIPGA-ADCY1-83740 |
84667 |
chr7:45484835 |
129912 C/T |
|
C (25) |
T (3) |
|
|
5% |
C |
C |
rs2272036 |
IIPGA-ADCY1-84667 |
85044 |
chr7:45485212 |
130289 C/T |
|
C (35) |
T (1) |
|
|
2% |
C |
C |
|
IIPGA-ADCY1-85044 |
85046 |
chr7:45485214 |
130291 A/G |
|
G (35) |
A (1) |
|
|
2% |
G |
G |
|
IIPGA-ADCY1-85046 |
88546 |
chr7:45488713 |
133790 A/G |
|
A (46) |
G (2) |
|
|
3% |
A |
A |
rs2280497 |
IIPGA-ADCY1-88546 |
88562 |
chr7:45488729 |
133806 A/G |
940 A/T |
G (47) |
A (1) |
|
|
2% |
G |
G |
|
IIPGA-ADCY1-88562 |
93485 |
chr7:45494104 |
139181 A/G |
1030 R/R |
G (34) |
A (4) |
|
|
7% |
G |
G |
rs2293106 |
IIPGA-ADCY1-93485 |
93494 |
chr7:45494113 |
139190 C/T |
1033 Y/Y |
C (41) |
T (1) |
|
|
2% |
C |
C |
|
IIPGA-ADCY1-93494 |
93758 |
chr7:45494377 |
139454 G/T |
|
G (44) |
T (2) |
|
|
3% |
G |
G |
|
IIPGA-ADCY1-93758 |
|
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© 2001-2004, Alberto Riva, CHIP |