 |
SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
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| Prettybase importer |
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| Gene: |
ARRB2 |
Region searched: |
chr17:4,810,374-4,841,384 |
| Match orientation: |
Forward |
Processing time: |
0.54 seconds |
| Total SNPs: |
6 |
Correct: |
3 |
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| Imported SNPs |
|
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
| 5629 |
chr17:4825681 |
5074 C/T |
|
C (24) |
T (4) |
|
|
7% |
C |
C |
|
IIPGA-ARRB2-5629 |
| 9089 |
chr17:4829141 |
8534 A/G |
|
A (42) |
G (14) |
|
|
23% |
A |
A |
|
IIPGA-ARRB2-9089 |
| 5751 |
[not matched: out of sequence] |
IIPGA-ARRB2-5751 |
| 9418 |
chr17:4829470 |
8863 A/G |
|
G (32) |
A (24) |
|
|
39% |
A |
A |
rs2271167 |
IIPGA-ARRB2-9418 |
| 9176 |
[not matched: out of sequence] |
IIPGA-ARRB2-9176 |
| 7466 |
[not matched: out of sequence] |
IIPGA-ARRB2-7466 |
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| © 2001-2004, Alberto Riva, CHIP |